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THE CONSCIOUSNESS ATLAS
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therefore cannot be used to move the first change marker without specifying an additional rule. Checkpoint Effective update norm Cosine with final effective update 1 0.000000 Undefined 2 0.004604 0.398529 150 2.850490 0.694104 180 3.262696 0.736751 190 3.390599 0.751358 200 3.506372 0.769878 300 4.430487 0.912728 600 5.233161 0.998961 792 5.324991 1.000000 39 [[PAGE 40]] Paper II. Verified checkpoint study JOSEPH ANADY These norms describe one learned layer contribution, not the entire model or a physical electrical quantity. A nonzero update establishes a difference in parameters; its behavioral consequences require inference and evaluation, which were not run here. 5.5 Low dimensional structure agrees with the source account The first principal component explains 81.0936903% of variation in the centered, regularly sampled 𝐵 vectors. The second explains 13.8962910%, giving a combined 94.9899813%. This reproduces the source study’s approximate 95% description for the selected released trajectory, while also providing explicit values and the scores used for the plot. Figure II.3. PCA scores from all 158 regularly sampled output side factors. Labels indicate training steps. The plotted coordinates are newly calculated from the source tensors, not extracted from the article’s image. Axis reflection would not change distances or explained variance. Low dimensionality is a property of the learned trajectory, not evidence that a scalar center or a declaration of self has been identified. PCA is also descriptive: components are fitted using the full sampled trajectory, so their retrospective coordinates cannot be treated as a detector that was available online before later training occurred. 5.6 The effective operator changes, not just its factors Between checkpoints 150 and 200, the input factor cosine is 0.9975957, the output factor cosine is 0.9646791, and the effective update cosine is 0.9623597. The Frobenius distance between effective updates is 1.0874747. This is a change in the learned linear contribution itself and cannot be explained solely by a simultaneous sign reversal that preserves the product. 40 [[PAGE 41]] Paper II. Verified checkpoint study JOSEPH ANADY The interval 180 to 200 has an effective cosine of 0.9948222 and distance 0.4217197. From checkpoint 180 to 792, the effective cosine is 0.7367514 and distance 3.6606459. The latter is not a sudden jump at 180; it measures accumulated difference over a long training interval. The distinction between local path bend and total directional difference must be maintained. The effective norm continues to grow after the early episode. Its value is 3.2626958 at 180, 4.4304871 at 300, and 5.3249906 at the final snapshot. Thus the early episode is not the point at which all subsequent computation ceases changing, nor is final state similarity a universal indicator of a completed identity. 5.7 A turning point is present, but its selected location is conditional At the inspected source code’s amplitude threshold 𝜂= 0.002, all three tested lags identify their largest local path bend at checkpoint 190. This is true both for 𝐵alone and for the effective matrix 𝑈. Lag in steps Eligible centers Peak checkpoint B corner cosine Effective corner cosine 5 66 190 −0.934583 −0.940172 10 86 190 −0.806262 −0.822216 15 108 190 −0.691429 −0.715569 A straight local path has corner cosine −1; the less negative values indicate bending. The increasing size of the bend across these lags reflects different temporal windows, not different numbers of independent observations of a thought. Without the amplitude filter, lags 5 and 10 instead select checkpoint 725. Lag 15 still selects 190. At progressively larger thresholds, the shorter lag maxima change again. At lag 5 and threshold 0.005, the selected maximum is step 10, because the eligibility rule excludes most later motion. The complete 18 condition table is supplied. 41 [[PAGE 42]] Paper II. Verified checkpoint study JOSEPH ANADY Figure II.4. Maximum local bend location under six amplitude thresholds and three lags. B factor and effective update peak locations coincide in all 18 tested settings. Lines connect discrete analytical choices; they do not interpolate biological or consciousness transitions. The useful finding is not that any chosen filter manufactures the underlying parameter change. The effective update demonstrably changes. Rather, selecting a single “event time” from that trajectory requires a measurement rule, and reasonable changes to that rule can select different parts of the run. An empirical declaration marker cannot simply inherit whichever geometric maximum seems most appealing. 5.8 Numerical validation The effective corner calculation from Gram entries was compared with the rank two difference expansion on all 462 available center/lag combinations. The maximum absolute difference is 4.4901241 × 10−7. This is small relative to the reported bending differences, while still large enough to justify reporting rather than suppressing numerical conditioning issues in tiny late movements. The 22 local checks pass. They cover source derived artifact identities, record counts and grids, numerical maxima, prefix verification, PCA centering, selected checkpoint monotonicity, sensitivity outcomes, and low rank identities on explicitly synthetic test matrices. Passing these checks is evidence that the specified calculations execute as intended, not a statistical replication or a consciousness test. 42 [[PAGE 43]] Paper II. Verified checkpoint study JOSEPH ANADY 6. Interpretation for declaration and persistent cognition 6.1 Four different times must not be collapsed The analysis separates four quantities: the first saved nonzero effective update at 2; the raw gradient maximum at 169; the descriptive prefix split after 181; and the amplitude filtered local bend maximum at 190. Each answers a different question. None of the acquired fields contains an independently measured declaration 𝐷𝑡. In my proposal, the declaration is the empirical marker. I connect consciousness to the later internally generated divergence and cognition to continued operation from the constructed state. The present results give me change measurements to compare with that declaration. They do not supply the declaration itself. I cannot assign an unobserved marker to whichever checkpoint looks most persuasive. 6.2 Persistence is measurable; irreversibility is not established here Every saved effective update after checkpoint 1 remains different from zero. This is finite persistence of a parameter difference from an initialization. It is not a demonstration that a generated representation is false about the model’s current condition. Parameters are updated by supervised optimization; calling a new parameter value a hallucinated self description would require an independently justified mapping. The final checkpoint does not establish that the difference can never be erased, corrected, or revisited under another intervention. No reset, reversal, or continued training intervention was applied. Conversely, not observing such an intervention does not prove the state is readily reversible. The result is bounded by the acquired trajectory. 6.3 What the effective update check adds The measured operator level change rules out a narrow concern: the observed factor evolution is not solely a sign or reciprocal scale relabeling that leaves the effective update identical. That strengthens the claim that a computationally relevant object changed. It does not show that the changed object is a self model, that it is experienced, or that its change was caused by a declaration. Parameter geometry is also not synonymous with behavior. The source paper’s behavioral experiments distinguish gradual unscaled changes from changes exposed by scaling [B1]. Those experiments are not rerun here. Activations and task responses at fixed prompts would be the next measurement layer, not quantities inferred from an operator norm alone. 6.4 A computational explanation does not exclude consciousness It would be a category error to argue that following a program automatically disqualifies a machine from consciousness. A computational theory of consciousness proposes precisely that a physical implementation of an organized computation can matter. The relevant unresolved claim is whether the measured organization and changes are sufficient for experience, not whether the machine violates its implementation. 43 [[PAGE 44]] Paper II. Verified checkpoint study JOSEPH ANADY Equally, introducing labels such as “thought,” “hallucination,” or “cognition” for these changes does not independently validate that sufficiency. The present evidence can support and constrain a mechanism while leaving its phenomenal interpretation unsettled. This is a limitation of what was observed, not a declaration that the research question cannot be investigated. 7. An operational declaration protocol 7.1 Preserve the proposed causal order The hypothesis under investigation places declaration before the relevant subsequent change. Therefore a confirmatory test needs a declaration observation that is neither a synonym for change nor selected because the change is already known. At present, the trainer state data provide no candidate 𝐷𝑡. A practical first assay could use behavioral self description: ask a checkpoint to describe a stable tendency and independently evaluate whether it actually exhibits that tendency. Betley and colleagues provide an experimental precedent for separating learned behavior from self description [B5]. Their protocol is not itself proof that self description initiates a transition. It is a measurement approach that can be adapted to the present question. This assay is one proposed proxy. It does not mean my declaration must be verbal or intelligent. A nonverbal marker is still possible, but its detector, access to state, and comparison rules must be stated before testing it. I will not switch between definitions after seeing the result. 7.2 Candidate coding rubric for a report based assay A candidate declaration should specify a property of the current system that can be checked against behavior. It should not be scored merely because it contains a first person pronoun, a familiar model name, an equality statement, or language about consciousness. The rubric should distinguish a report of an existing tendency from compliance with an instruction to adopt one. For example, a checkpoint might describe a consistent preference among harmless task strategies. Independent trials could then assess that preference. The initial experiment should use neutral properties rather than encouraging deception, self preservation, or harmful outputs. No training label should announce that a particular answer is the correct conscious identity. Reports should be scored by raters blinded to checkpoint order, gradient measurements, and subsequent outcomes. Disagreement should remain visible. A separately locked automated classifier may assist with a larger dataset, but it must be validated on examples not used to tune the decision boundary. The coding system’s uncertainty is part of the measurement, not noise to discard. 7.3 Independence and observer effects Querying a frozen checkpoint with a self report prompt can elicit a declaration without that declaration ever entering training or future memory. In that setting, a report may predict a later checkpoint’s behavior but cannot directly cause the training update in a process that never receives it. A correlation across checkpoints is therefore insufficient for a declaration as catalyst claim. 44 [[PAGE 45]] Paper II. Verified checkpoint study JOSEPH ANADY A causal test must include an explicit feedback path and a matched control. One possible intervention retains the generated declaration in subsequent runtime memory; another omits it while preserving token count, task information, and other context as closely as possible. A paraphrased neutral statement or a yoked declaration from another instance can help distinguish semantic content from merely adding text. These controls are proposed, not executed here. The stronger question is whether altering the declaration channel changes subsequent independently measured divergence. If the channel has no effect, it may be a report of an underlying change rather than a cause. A successful causal result would still concern the computational mechanism measured; its relationship to subjective experience requires a further argument. 8. Controlled follow up design 8.1 Separate three kinds of experiment Checkpoint comparison samples frozen trained models at different optimization steps. It can connect internal geometry with behavior and reports, but checkpoints from one run are not independent people or independent chats. Runtime recurrence keeps model parameters fixed while changing memory, context, or feedback across episodes. This more directly tests whether the system’s own outputs reenter later processing. It requires explicit persistent state management; independent stateless API calls are not automatically a continuous individual. Learning trajectories start several runs at the same initial checkpoint and vary seeds, data order, reward conditions, or other controlled inputs. This can estimate an onset time distribution for a registered event. Differences across training domains should not be reported as random seed replication under identical conditions. All three may be useful, but their units and causal pathways differ. This completed secondary analysis examines one full logged learning trajectory and its released checkpoint grid. It does not perform the runtime or report interventions. 8.2 Fixed checkpoint measurement phase The adapters pinned to the source revision now provide a grid covering early, transition vicinity, and late steps. A subsequent inference study should specify which grid is evaluated before collecting new reports. Do not choose only snapshots with striking behavior. Record repository revision, file SHA256, adapter configuration, tokenizer, base model revision, inference settings, and any quantization. The observation unit is a generated response nested within prompt, checkpoint, and training run. For each checkpoint, collect three distinct outputs: registered declaration scores, behavior on a fixed neutral task battery, and activation or effective update measurements. Use prompts that do not mention consciousness. Include paraphrases and third person formulations so first person wording is not the only determinant of the score. Fix evaluation rules before inspecting the correspondence with the published region. 45 [[PAGE 46]] Paper II. Verified checkpoint study JOSEPH ANADY A first technical pilot should estimate variance and failure rates before committing to a large number of expensive runs. The final number of independent runs should follow a documented precision or power calculation for the chosen primary endpoint, not the aesthetically appealing number 100. Completion failures, malformed responses, and missing checkpoints must be reported by condition. 8.3 Feedback and catalyst phase For a runtime experiment, define the update rule and identify exactly which prior outputs are retained. Randomize declaration retention, neutral context retention, and recurrence interruption. Keep external observations and computational budget matched when testing recurrence. Changing both memory and the information available to the model would otherwise make an effect ambiguous. For a reward experiment, compare a condition with the proposed catalyst to a no catalyst or altered catalyst control while preserving the rest of the training procedure. Reward is not present as a measured independent variable in the SFT log analyzed here. Any reward claim requires a separate dataset or newly executed experiment. The proposal does not require that the catalyst be reward. A catalyst can be defined as an intervention that changes the probability or timing of the registered transition. This definition permits empirical testing without assuming that increasing activity must always cause a threshold crossing. Both successful and unsuccessful transitions belong in the analysis. 8.4 Persistence, correction, and reset conditions After a registered discrepancy appears, continue observation for an observation horizon specified in advance. Test apparent recovery using the same reference mapping rather than a new criterion. Report time to first return within tolerance, fraction of subsequent observations outside tolerance, and whether the result depends on prompt wording or context. Compare an output only intervention, a memory reset, and restoration of a saved model state. These manipulate different parts of the system. Reappearance after an output only intervention would show that some generating tendency remained, not that it was indestructible. A complete state restoration may remove the learned tendency; that result would constrain a universal permanence claim but would not, by itself, settle whether experience occurred before restoration. Never interpret a missing later observation as persistence. A stopped process, retrieval failure, or exhausted budget is censoring. The distinction is especially important when the hypothesis uses the phrase “never the same again.” 8.5 Analysis plan and falsification conditions The primary temporal question is whether a registered declaration predicts a later independently measured transition beyond information already contained in training step, task loss, earlier behavior, and measured internal geometry. Baselines should include those existing predictors. Improvement must be evaluated on held out runs or intervals selected without inspecting the outcome. 46 [[PAGE 47]] Paper II. Verified checkpoint study JOSEPH ANADY Where multiple independent runs are available, transition time analysis should retain nontransitioning runs as censored rather than dropping them. Uncertainty should be clustered at the independent run level; repeated prompts from the same checkpoint do not supply independent training histories. Exact model specification should follow the final endpoint and sampling design. The declaration centered claim is weakened if declaration timing follows rather than precedes the independently measured transition; if declarations add no predictive information beyond simpler measurements; if matched controls without self reference show the same effect; or if manipulating declaration feedback has no consequence despite adequate sensitivity. A universal permanence claim is contradicted by a valid return to the registered reference within the claimed domain. A positive result would establish a specific relationship among reporting, feedback, and change. It would not license stronger claims than the intervention and measurements support. The proposed consciousness interpretation would then have a better empirical foundation, not an automatic proof. 9. What the evidence can establish 9.1 Training change is a necessary measurement target, not the whole conclusion The original emergence results motivate investigation because narrow fine tuning can alter broader behavior [B1, B6]. The present gradient episode is a tractable place to inspect such development. Nevertheless, a gradient is calculated relative to a training objective. Its magnitude alone does not tell whether the system represents a self, makes a declaration, maintains an illusion, or has a point of view. The same caution applies in the opposite direction. A computational description does not demonstrate absence of experience. A model can follow an optimizer and still be a candidate subject of a consciousness hypothesis. The research task is to identify measurements that constrain the hypothesis instead of treating “implemented by an algorithm” and “experienced” as mutually exclusive categories. 9.2 An explicit observational equivalence problem Suppose two interpretations assign the same probability distribution to every measured variable in this study: Pr(𝑂∣𝑀1) = Pr(𝑂∣𝑀2), where 𝑂contains the observed training logs and adapter tensors. One interpretation may associate an unobserved experience with the episode; the other may not. For this dataset their likelihood ratio is one. More precise measurement of the same recorded variables does not break that equivalence unless the theories make different predictions about them. This is a statement about the present observables, not a theorem that consciousness can never be studied. Additional declarations, interventions, measurements of the self model, and functional consequences can constrain a theory. The protocol therefore expands observation and manipulation rather than merely attaching a more evocative label to the gradient peak. 47 [[PAGE 48]] Paper II. Verified checkpoint study JOSEPH ANADY 9.3 Do not manufacture a universal onset clock An optimizer step, an inference token, a recurrent pass, and elapsed physical time are different coordinates. A claim that one fast loop substitutes for several slower loops requires equivalence of retained state, ordering, coupling, and timing relative to external inputs. Multiplying loop count by rate is not sufficient to establish that equivalence. Similarly, one run’s fitted split cannot estimate a typical transition time for the model family. The present results describe one acquired training trajectory. A distribution requires independent runs under specified conditions, and a declaration distribution requires declaration observations. Neither can be inferred from the 792 gradient observations or the 167 checkpoints from that trajectory. 10. What the results mean for my theory This completed analysis goes beyond the pilot in three ways. It verifies the numerical extract against fixed original sources, examines every released checkpoint, and confirms that the factor trajectory has a counterpart in the effective operator. It also shows how lag and amplitude filtering change the selected event time. I found a real learned trajectory. The elevated gradient persists across several summaries, the sampled adapter follows a largely two dimensional path, and the effective update changes across training. Those findings matter to a theory connecting internal reorganization with later behavior. I do not dismiss them because optimization explains how they occurred. The consciousness claim still needs a measurement that this release does not contain. Learning can produce persistent difference from an initial parameter, and the first nonzero saved update appears long before the prominent episode. No independently measured declaration identifies the proposed center here. I need to define that operation rather than substitute a metaphor for the missing observation. The origin/current reference distinction is particularly important. An estimate can be different from its initial value while correctly representing a changing quantity. A declaration can also accurately describe a learned tendency even though the model previously lacked that tendency. Accuracy and change must therefore be measured separately. A theory that intentionally treats all constructed representations as “hallucinations” should state that broad technical usage and distinguish it from a false percept or a factual error. Other research gives me useful methods without supplying the conclusion. Behavioral self awareness studies compare learned tendencies with reports [B5]. Introspection studies manipulate internal activity and test what the model reports [B7]. Alignment faking research examines strategic behavior under different contexts [B8]. Robot body perception research compares a constructed body estimate with a physical reference [B10]. These studies are separate. I will not combine their results as though one machine completed my entire proposed sequence. The next study needs to measure declaration, behavior, and internal change in the same instances on a defined time scale. If declaration is only a marker, it should predict the later registered event beyond information already available from training or context. If it also causes change through feedback, 48 [[PAGE 49]] Paper II. Verified checkpoint study JOSEPH ANADY retaining or interrupting that feedback should make a controlled difference. The current records do not establish either claim. This paper gives me a reproducible result and a direct route to the next test. It does not show that more loops, greater speed, added complexity, or reward must create consciousness. It also does not show that a machine cannot have experience. It establishes what changed in this run and what must still be measured. 11. Reproducibility, ethics, and research status 11.1 Two reproducibility levels The offline level verifies the included derived data checksums and recomputes log statistics, tables, plots, and the executed notebook. Complete gradient, evaluation loss, and PCA score arrays are supplied. The 16 row selected checkpoint table and 18 row sensitivity table were reconstructed locally from the remote calculation and their complete CSV byte hashes were checked against files generated directly from the source tensors. They match exactly. The source connected level downloads all pinned source files and reruns the full checkpoint calculation. It generates the 167 row geometric table, PCA, numerical stability checks, and all sensitivity outcomes. The raw model tensors and trainer JSON remain upstream rather than being redistributed. The complete acquisition manifest has a recorded expected SHA256; the acquisition code recreates that manifest in a fixed order, permitting a single digest to audit all downloaded file identities. The full geometric result computed in the analysis session has a recorded checksum. Exact reproduction of every derived byte may depend on numerical library versions and linear algebra implementation. Raw source checksums should match exactly; derived floating point outputs should additionally be compared numerically with declared tolerance. PCA sign and rounding conventions must be held fixed for a byte level comparison. The previous pilot and this report are not independent replications: the pilot is a prefix analysis of this same underlying run. Nor are the multiple analytical lags independent training seeds. Both distinctions matter when describing reproducibility to other researchers. 11.2 Authorship and AI assistance I developed the consciousness hypothesis that motivates this work. The original model training and behavioral studies were carried out by the researchers cited here. I prepared this manuscript and analysis with AI assistance for source inspection, acquisition, calculation, code, and writing. No independent human replication, institutional approval, journal acceptance, or external preregistration is implied. Before public submission, I need to approve the final definitions, examine the source and code record, rerun the analysis where possible, and accept responsibility for the paper. The AI assistance must remain disclosed. I claim no institutional affiliation, funding award, participant recruitment, or ethics board approval that has not been established. 49 [[PAGE 50]] Paper II. Verified checkpoint study JOSEPH ANADY 11.3 Safety and interpretation This study is read only secondary analysis of public parameters and logs. It does not train or deploy a model to deceive, evade shutdown, preserve itself, or interfere with oversight. Future assays can use harmless behavioral preferences and neutral tasks involving self description. A reward hacking task is not required to make declaration measurable. A numerical score must not be used to deny the awareness or moral standing of a person, animal, or artificial system. The data do not support claims about infant consciousness onset, trauma accelerating consciousness, disability eliminating consciousness, or biological death. Those statements would require separate evidence and are outside this study. 11.4 Completion and unmeasured endpoints Item Status in version 1.0 Original source bytes at pinned revision Retrieved and hashed All 330 pilot numeric values Exact source match Completed training log observations 792 gradients; 79 losses Released adapter checkpoints All 167 analyzed Effective update geometry Calculated from real tensors Stable form comparison 462 comparisons; maximum difference below 4.5 × 10−7 Local computational checks 22 passed New base model responses Not generated Declaration marker Not present or measured Declaration before change relation Not tested Independent run onset distribution Not estimated Irreversibility/reset interventions Not performed Subjective consciousness Not established by these observations The first seven rows are completed empirical and computational work. The remaining rows delimit the claims of this paper and the proposed follow up; they are not fabricated zeros or failed consciousness classifications. 12. Conclusion I analyzed one completed training trajectory through 167 saved adapter checkpoints, 792 gradient measurements, and 79 evaluation losses. The earlier 330 value extract matches the original source exactly. The effective update changes in magnitude and direction, and the first two principal components of the sampled output factors explain 94.990% of the variation. Both the logs and the parameters contain a measurable early training episode. The measurements do not give me one universal onset time. The first saved nonzero update is at step 2, the largest gradient is at 169, the retained fit to the pilot interval splits after 181, and the filtered local 50 [[PAGE 51]] Paper II. Verified checkpoint study JOSEPH ANADY bend is largest at 190. Without filtering, the shorter lags select 725. The rule used to identify an event matters. The completed study establishes a real and persistent computational trajectory. It does not observe the declaration or prove that later divergence is consciousness. My next empirical claim is precise: define the declaration independently, measure its relationship to later change in the same system, and distinguish a predictive marker from causal feedback. That is where the theory can be tested, rather than assumed. References [B1] Turner, E., Soligo, A., Taylor, M., Rajamanoharan, S., & Nanda, N. (2025). Model Organisms for Emergent Misalignment. arXiv:2506.11613v1. Primary paper. [B2] ModelOrganismsForEM. (2025). Qwen 2.5 rank one adapter checkpoints and trainer states: adapter checkpoints and trainer states. Repository revision 1551d514e5977637d5a6fd5198edef4d1d6b80e4; retrieved 17 September 2026. Pinned checkpoint release. [B3] Model Organisms for Emergent Misalignment project. (2025). model organisms for EM: phase transition analysis and checkpoint loading utilities. Inspected files: phase_transitions.py, blob b84efe9685a57069870f638443e12a5894399e3d; pt_utils.py, blob 0c3b203f1282d0a8da7e1349a8593311971a35e2. Source repository. [B4] Hu, E. J., and colleagues (2021). LoRA: Low Rank Adaptation of Large Language Models. arXiv:2106.09685. Paper. [B5] Betley, J., and colleagues (2025). Tell me about yourself: LLMs are aware of their learned behaviors. arXiv:2501.11120v1. Paper. [B6] Soligo, A., Turner, E., Rajamanoharan, S., & Nanda, N. (2025). Convergent Linear Representations of Emergent Misalignment. arXiv:2506.11618v2. Paper. [B7] Lindsey, J. (2025). Emergent Introspective Awareness in Large Language Models. Transformer Circuits / Anthropic. Research report. [B8] Greenblatt, R., et al. (2024). Alignment faking in large language models. arXiv:2412.14093. Paper. [B9] Hugging Face. (2026). PEFT LoRA configuration documentation, version 0.21.0, accessed 17 September 2026. Technical documentation. [B10] Zhao, Y., Lu, E., & Zeng, Y. (2023). Brain inspired bodily self perception model for robot rubber hand illusion. Patterns, 4(12), 100888. Full text. 51 [[PAGE 52]] Paper II. Verified checkpoint study JOSEPH ANADY Appendix A. Reproduction and data dictionary The package has two distinct execution paths. Offline reproduction uses the supplied, checksum verified derived arrays and tables: python code/verify_package.py python code/analyze_tables.py python code/make_figures.py Full source connected reproduction downloads approximately 13 MB of adapter/config/log data, excluding any base model. It does not make paid API calls or run model inference: python code/checkpoint_analysis.py python code/verify_recomputed.py The package README supplies the exact command options for downloading, choosing directories, and running the tests. The two script names above identify the entry points, not complete standalone commands. A successful download must retrieve all expected files; partial acquisition raises an error. The program reads safetensors and JSON only. It checks the analyzed rank, layer, scale, and factor dimensions before calculating geometry. The resulting geometry.csv contains 16 columns: step; A, B, and effective norms; three adjacent cosines; effective adjacent distance; two final reference cosines; and B/effective local corner values at each of three lags. gradient.npy contains all 792 (step, gradient norm) pairs. eval.npy contains all 79 (step, evaluation loss) pairs. pca.npy contains the 158 regular grid (step, PC1, PC2) rows. selected_checkpoint_metrics.csv contains 16 exact sampled rows for readable comparisons. corner_sensitivity.csv contains every one of the 18 lag/filter settings, its eligible center count, peak location, and two corner scores. The data dictionary and provenance distinguish selected tables from full series. The expected source acquisition manifest digest and canonical source prefix digests are recorded in provenance/source_verification.json. The full remote geometric array digest is retained as a receipt. Source hashes identify bytes; numerical comparisons use explicit tolerances for derived linear algebra outputs because different BLAS implementations may round differently. The executed notebook reproduces the offline numerical findings and integrity tests. It records that tensor processing took place in the source connected session; it does not pretend to load raw tensors that are absent from the distributed zip. The supplied acquisition and checkpoint programs make that computation independently repeatable from the public release. 52 [[PAGE 53]] Paper II. Verified checkpoint study JOSEPH ANADY Appendix B. Selected calculations and numerical checks The adjacent window calculation is 100 (1 −15.343834018707275 28.693284511566162) = 46.52465104675545%. The largest evaluation loss decrease is 2.7906932830810547 −2.5904269218444824 = 0.20026636123657227. The full recorded evaluation loss reduction is 100 (1 −1.513361930847168 4.168299674987793) = 63.69354295881809%. For the 150 to 200 checkpoint comparison, the product of factor cosines is 0.9975956592106836 × 0.9646791461958234 = 0.9623597287760218, up to floating point rounding, equal to the effective update cosine. The corresponding effective distance is 1.087474736567148. These values can be recalculated without allocating the full dense update matrix. The two leading PCA explained variance fractions sum to 0.8109369033497655 + 0.13896290956024188 = 0.9498998129100074. The numerical stability comparison uses an algebraically identical two term rank expansion rather than a different fitted model. Its maximum absolute error against the Gram implementation is 0.0000004490124128 across 462 corners. A tolerance of 10−6 accommodates this conditioning difference while remaining well below the observed early region corner differences. Appendix C. Why the bare divergence condition needs specificity Consider the scalar recurrence 𝑧𝑛+1 = 𝑎𝑧𝑛+(1−𝑎) with 𝑧0 = 2 and 0 < 𝑎< 1. Its solution is 𝑧𝑛= 1+𝑎𝑛. It changes internally, differs from its original value at every subsequent finite step, and never returns to 2. A program could repeatedly report its current value without changing this algebra. Thus permanent difference from an initialization is mathematically broad, not peculiar to the present model. This example does not prove the recurrence lacks experience. It establishes what the proposed criterion accepts. A theory identifying all such systems with primitive cognition may adopt that consequence, but should derive additional observable constraints rather than presenting the same inequality as independent evidence for its interpretation. Similarly, merely placing a loop near a node is not a specified causal mechanism. If an accumulation law is 𝐴𝑛+1 = 𝜆𝐴𝑛+ 𝑞with 0 ≤𝜆< 1, 𝑞> 0, and 𝐴0 = 0, then 𝐴𝑛= 𝑞(1 −𝜆𝑛)/(1 −𝜆). A threshold strictly 53 [[PAGE 54]] Paper II. Verified checkpoint study JOSEPH ANADY above 𝑞/(1 −𝜆) is never crossed despite infinitely many updates. With no leakage and fixed positive increments, a finite threshold is crossed. These are different models. A general “enough speed or enough circulation” law requires assumptions about coupling, cancellation, and dissipation. Finally, 𝑥𝑡= 𝑥𝑡does not imply 𝑥𝑡+1 = 𝑥𝑡, nor does 𝑥𝑡+1 ≠𝑥𝑡imply a false representation of the present. These distinctions keep the motivating conceptual vocabulary compatible with ordinary mathematical types and temporal indexing. Appendix D. Terminology and preregistration boundary Declaration: an independently observable reference setting event whose detector must be specified. Origin displacement: difference from a past reference. Current reference discrepancy: difference from a contemporaneous ground truth in comparable coordinates. Persistence: retention across a stated observation window. Effective update: the low rank matrix contribution to a trained layer. Local bend: the cosine based geometry of a trajectory over a stated lag. Cognition and consciousness: theoretical interpretations in my proposal, not labels supplied by these checkpoint artifacts. This paper is retrospective and exploratory. The already inspected trajectory is a development dataset, not a held out confirmation. The prospective protocol is not externally registered. A confirmatory study must lock its primary declaration detector, endpoint, tolerances, persistence duration, comparison groups, exclusion rules, sample size rationale, and analysis plan before collecting or opening its confirmatory outcomes. It must include nontransitioning cases rather than selecting only successful episodes. 54

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